中國漢族人群IL-4基因三個多態(tài)位點(rs2227284,rs2243283and rs2243288)的單核苷酸多態(tài)性
[Abstract]:BACKGROUND The consequences of hepatitis B virus (HBV) infection are mainly affected by virus, host and environment. With the increasing awareness of HBV, the influence of host genetic factors on the consequences of HBV infection has attracted more and more attention. Cytokine gene polymorphism has become a research hotspot. Interleukin-4 (IL-4) plays a key role in regulating the dynamic balance of T-lymphocyte subsets, and the imbalance of T-lymphocyte subsets can affect human response to therapeutic vaccines and susceptibility to human autoimmune diseases. Interferon-gamma (IFN-gamma) and inflammatory mediators are produced to prevent inflammation from damaging the liver. It has also been reported that mutations in the IL-4 gene may alter its expression and its downstream signals, thereby increasing individual susceptibility to immune-related liver diseases. Thus, its single nucleotide polymorphism (SNP) may be involved. It can be correlated with the incidence and clinical outcomes of chronic hepatitis B (CHB).
Objective To study the relationship between IL-4rs2227284G/T, rs2243283C/G and rs2243288A/G loci SNP and chronic HBV infection in Chinese Han population.
Methods 501 patients with chronic HBV were randomly divided into case group and 301 patients with acute self-limited HBV infection as control group. The linkage disequilibrium coefficients (D') between two or two loci of the above three loci were calculated.
Result
1. The distribution frequencies of TT, GT and GG genotypes at rs2227284 locus were 74.3%, 24.3% and 1.4% respectively in case group, 76.1%, 22.3% and 1.6% in control group, 33.1%, 63.3%, 3.6% in case group, 30.2%, 65.1%, 4.7% in control group, and 30.2%, 65.1%, GA, AA genotypes at rs2243288 locus, respectively. _2 test showed that there was no significant difference in the genotypes of the above three loci between the two groups (p value: rs2227284, P = 0.969; rs2243283, P = 0.416; rs2243288 P = 0.685).
2. Statistical analysis showed that the frequencies of T allele at rs2227284 locus of IL-4 gene were 86.4% and 87.2% respectively in case group and control group, the frequencies of G allele at rs2227284 locus were 13.6% and 12.8% respectively in case group and control group. The frequencies of C allele at rs2243283 locus were 79.8% and 8% respectively in case group and control group. The frequencies of G allele at rs2243283 locus were 20.2% and 19.8% in case group and control group, respectively. The frequencies of G allele at rs2243288 locus were 80.8% and 81.7% in case group and control group, and the frequencies of A allele at rs2243288 locus were 19.2% and 18.3% in case group and control group, respectively. The allele frequencies of rs2227284, rs2243283 and rs2243288 were not significantly different between the case group and the control group (P values were rs2227284, P = 0.655, OR (95% CI) = 1.071 (0.793-1.445), rs2243283, P = 0.849, OR (95% CI) = 0.976 (0.758-1.257), rs2243288, P = 0.659, OR (95% CI) = 1.060 (0.818) - 1.375).
3. There were no significant differences among the three genetic models of additive model, dominant model and recessive model between the case group and the control group (the P values of the secondary allele, additive model, dominant model and recessive model were 0.771, 0.563, 0.766 respectively; the secondary allele, additive model, dominant model and recessive model, rs2243283 were G, additive model, dominant model and recessive model, respectively). The P values of the model were 0.571, 0.599 and 0.071, and the secondary alleles of rs2243288 were A, additive model, dominant model and recessive model were 0.902, 0.691 and 0.555 respectively.
4. The results showed that the haplotype frequencies of IL-4 GCA, TCA, TCG and TGG were 13.5%, 5.4%, 60.9%, 19.8% in the case group, 12.8%, 5.5%, 62.0% and 19.7% in the control group, respectively.
Conclusion Tag Single nucleotide polymorphisms (tagSNPs) rs2227284, rs2243283 and rs2243288 may not be associated with the chronicity of HBV infection in Chinese Han population.
【學(xué)位授予單位】:安徽醫(yī)科大學(xué)
【學(xué)位級別】:碩士
【學(xué)位授予年份】:2014
【分類號】:R512.6
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