銜接蛋白beta亞單位不同剪切體的克隆與鑒定
發(fā)布時(shí)間:2018-10-25 07:57
【摘要】:銜接蛋白2(adaptin protein 2,Ap2)是披網(wǎng)格蛋白小泡(clathrin-coated vesicles,CCVS)的重要組成部分,在蛋白質(zhì)通過細(xì)胞膜進(jìn)入胞質(zhì)的轉(zhuǎn)運(yùn)過程中發(fā)揮著重要作用。我們通過人類睪丸cDNA芯片的方法將成人和6月齡的胚胎睪丸進(jìn)行雜交比較,克隆了一個(gè)銜接蛋白2β(Ap2β)亞單位的不同剪接體-Ap2β-NY。芯片雜交結(jié)果顯示,Ap2β-NY在成人睪丸中mRNA的表達(dá)量是胚胎睪丸的3.62倍。對Ap2β-NY基因進(jìn)行測序,獲得全長序列并輸入GenBank,登錄號為AY341427。生物學(xué)軟件分析表明,全長為3457bp的Ap2β-NY基因編碼了一個(gè)具有880個(gè)氨基酸的蛋白質(zhì),預(yù)測此蛋白質(zhì)的分子量為98.12KDa,等電點(diǎn)PI為5.01,定位于人17號染色體上的q11.2-q12。對預(yù)測蛋白進(jìn)行生物信息學(xué)分析發(fā)現(xiàn),Ap2β-NY具有Ap2β的全部三個(gè)結(jié)構(gòu)域,即具有一個(gè)Ap2β氮末端結(jié)構(gòu)域,一個(gè)低度重復(fù)序列和一個(gè)Ap2β炭末端結(jié)構(gòu)域。但是Ap2β-NY的氮末端結(jié)構(gòu)域比Ap2β短了57個(gè)氨基酸殘基,并且這57個(gè)氨基酸殘基是疏水性的,很有可能位于蛋白質(zhì)的表面,是蛋白質(zhì)相互作用的結(jié)合位點(diǎn)。用反轉(zhuǎn)錄PCR(reverse transcription PCR,RT-PCR)的方法檢測成人和胚胎睪丸Ap2β-NY的表達(dá)狀況,證實(shí)了芯片雜交結(jié)果。同時(shí)精子RT-PCR表明Ap2β-NY在精子中也高表達(dá)。用Southern雜交的方法檢測Ap2β-NY在16種正常人體組織中的表達(dá)情況,發(fā)現(xiàn)Ap2β-NY高表達(dá)于脾臟、胸腺、前列腺、卵
[Abstract]:Binding protein 2 (adaptin protein 2 / Ap2 is an important component of drape grid protein vesicles (clathrin-coated vesicles,CCVS), which plays an important role in the transport of proteins into the cytoplasm through the cell membrane. Using human testis cDNA microarray, we compared adult testis with 6-month-old embryonic testis and cloned Ap2 尾 NY., a splice of different splicing units of Ap2 尾. The results of microarray hybridization showed that the expression of Ap2 尾-NY in adult testis was 3.62 times higher than that in embryonic testis. The Ap2 尾-NY gene was sequenced, the full-length sequence was obtained and the GenBank, login number was entered as AY341427.. The analysis of biological software shows that the Ap2 尾-NY gene with full length of 3457bp encodes a protein with 880 amino acids. The predicted molecular weight of the protein is 98.12 KDaand the isoelectric point PI is 5.01, which is located at q11.2-q12 on human chromosome 17. Bioinformatics analysis showed that Ap2 尾-NY had all three domains of Ap2 尾, namely, one Ap2 尾 N-terminal domain, one low-degree repeat sequence and one Ap2 尾 C-terminal domain. However, the nitrogen terminal domain of Ap2 尾-NY is 57 amino acid residues shorter than Ap2 尾, and the 57 amino acid residues are hydrophobic and probably located on the surface of protein and are binding sites for protein interaction. Reverse transcription PCR (reverse transcription PCR,RT-PCR (RT PCR (reverse transcription PCR,RT-PCR) was used to detect the expression of Ap2 尾-NY in adult and embryonic testis, which confirmed the results of microarray hybridization. At the same time, sperm RT-PCR showed that Ap2 尾-NY was also highly expressed in spermatozoa. The expression of Ap2 尾-NY in 16 normal human tissues was detected by Southern hybridization. It was found that Ap2 尾-NY was highly expressed in spleen, thymus, prostate and egg.
【學(xué)位授予單位】:南京醫(yī)科大學(xué)
【學(xué)位級別】:碩士
【學(xué)位授予年份】:2005
【分類號】:R341
本文編號:2293098
[Abstract]:Binding protein 2 (adaptin protein 2 / Ap2 is an important component of drape grid protein vesicles (clathrin-coated vesicles,CCVS), which plays an important role in the transport of proteins into the cytoplasm through the cell membrane. Using human testis cDNA microarray, we compared adult testis with 6-month-old embryonic testis and cloned Ap2 尾 NY., a splice of different splicing units of Ap2 尾. The results of microarray hybridization showed that the expression of Ap2 尾-NY in adult testis was 3.62 times higher than that in embryonic testis. The Ap2 尾-NY gene was sequenced, the full-length sequence was obtained and the GenBank, login number was entered as AY341427.. The analysis of biological software shows that the Ap2 尾-NY gene with full length of 3457bp encodes a protein with 880 amino acids. The predicted molecular weight of the protein is 98.12 KDaand the isoelectric point PI is 5.01, which is located at q11.2-q12 on human chromosome 17. Bioinformatics analysis showed that Ap2 尾-NY had all three domains of Ap2 尾, namely, one Ap2 尾 N-terminal domain, one low-degree repeat sequence and one Ap2 尾 C-terminal domain. However, the nitrogen terminal domain of Ap2 尾-NY is 57 amino acid residues shorter than Ap2 尾, and the 57 amino acid residues are hydrophobic and probably located on the surface of protein and are binding sites for protein interaction. Reverse transcription PCR (reverse transcription PCR,RT-PCR (RT PCR (reverse transcription PCR,RT-PCR) was used to detect the expression of Ap2 尾-NY in adult and embryonic testis, which confirmed the results of microarray hybridization. At the same time, sperm RT-PCR showed that Ap2 尾-NY was also highly expressed in spermatozoa. The expression of Ap2 尾-NY in 16 normal human tissues was detected by Southern hybridization. It was found that Ap2 尾-NY was highly expressed in spleen, thymus, prostate and egg.
【學(xué)位授予單位】:南京醫(yī)科大學(xué)
【學(xué)位級別】:碩士
【學(xué)位授予年份】:2005
【分類號】:R341
【參考文獻(xiàn)】
相關(guān)期刊論文 前1條
1 席曄斌,王保國,陳廣潔,包士三,李偉毅;大鼠Leydig細(xì)胞分泌的IL-1和TGF-β_1在感染時(shí)的免疫調(diào)節(jié)作用[J];生殖與避孕;2002年05期
,本文編號:2293098
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