水稻矮化少分蘗基因D26的圖位克隆及功能研究
發(fā)布時間:2021-02-13 23:19
作為重要的糧食作物,水稻從傳統(tǒng)的經(jīng)驗育種向現(xiàn)代精準育種轉(zhuǎn)變的過程中,株型是影響水稻產(chǎn)量最為重要因素之一,它取決于植株高度、分蘗數(shù)目、分蘗角度、穗形態(tài)等因素。對于水稻株型的機制研究,是短期內(nèi)難以突破的科學問題和技術難題,其中矮化突變體是非常理想的研究對象,但是調(diào)控機制知之甚少。本文在前期研究的工作基礎上,對水稻矮化、少分蘗D26突變體進行系統(tǒng)研究,揭示它參與水稻油菜素內(nèi)酯激素調(diào)控的信號通路機制。本文從水稻突變體庫中組織培養(yǎng)變異獲得了2個農(nóng)藝性狀表現(xiàn)矮化、少分蘗的突變材料D26-1和D26-2,通過圖位克隆實現(xiàn)精細定位和進一步的功能分析,揭示了D26突變體矮化表型的遺傳機理,并從互作蛋白篩選和轉(zhuǎn)錄組測序分析角度,進一步挖掘水稻矮化機制。主要結果如下:D26突變體一個隱性單基因控制表型。利用D26突變體做母本和93-11親本做父本,構建雜交F2群體,通過425個群體和531個群體將其分別定位在3號染色體短臂上63 kb區(qū)間,該區(qū)間內(nèi)包含12個候選基因;分析預測和克隆、測序表明D26基因是一個編碼GRAS家族蛋白的轉(zhuǎn)錄因子,兩個突變體在D26基因540 bp和560 bp...
【文章來源】:華僑大學福建省
【文章頁數(shù)】:143 頁
【學位級別】:博士
【部分圖文】:
水稻油菜素內(nèi)酯相關基因研究網(wǎng)絡(Tong,2018)
D26基因分別從水稻秈稻明恢86和D26突變體的c DNA中擴增獲得全長,片段回收與pMD18-T連接、測序比對分析;パa實驗載體構建:一個含有D26基因啟動子、c DNA全長和3"UTR非編碼區(qū)3563 bp全長片段從中間載體p UPGWPR上由HindIII/Eco RV酶切,與Bam HI酶切p CAMBIA1300載體分別回收,兩片段經(jīng)平端連接,最終構建互補載體p CAMBIAGWP26(見圖1)。2.2.8 植物葉片總RNA提取-TRIzol法
轉(zhuǎn)錄組測序流程
【參考文獻】:
期刊論文
[1]Brassinosteroid-regulated plant growth and development and gene expression in soybean[J]. Wenchao Yin,Nana Dong,Mei Niu,Xiaoxing Zhang,Lulu Li,Jun Liu,Bin Liu,Hongning Tong. The Crop Journal. 2019(03)
[2]OsIDD2, a zinc finger and INDETERMINATE DOMAIN protein, regulates secondary cell wall formation[J]. Peng Huang,Hideki Yoshida,Kenji Yano,Shunsuke Kinoshita,Kyosuke Kawai,Eriko Koketsu,Masako Hattori,Sayaka Takehara,Ji Huang,Ko Hirano,Reynante Lacsamana Ordonio,Makoto Matsuoka,Miyako Ueguchi-Tanaka. Journal of Integrative Plant Biology. 2018(02)
[3]A zinc finger protein, interacted with cyclophilin,affects root development via IAA pathway in rice[J]. Peng Cui,Hongbo Liu,Songlin Ruan,Basharat Ali,Rafaqat Ali Gill,Huasheng Ma,Zhifu Zheng,Weijun Zhou. Journal of Integrative Plant Biology. 2017(07)
[4]OsGRF4 controls grain shape, panicle length and seed shattering in rice[J]. Pingyong Sun,Wuhan Zhang,Yihua Wang,Qiang He,Fu Shu,Hai Liu,Jie Wang,Jianmin Wang,Longping Yuan,Huafeng Deng. Journal of Integrative Plant Biology. 2016(10)
[5]Rapid improvement of grain weight via highly efficient CRISPR/Cas9-mediated multiplex genome editing in rice[J]. Rongfang Xu,Yachun Yang,Ruiying Qin,Hao Li,Chunhong Qiu,Li Li,Pengcheng Wei,Jianbo Yang. Journal of Genetics and Genomics. 2016(08)
[6]TALEN-Mediated Homologous Recombination Produces Site-Directed DNA Base Change and Herbicide-Resistant Rice[J]. Ting Li,Bo Liu,Chih Ying Chen,Bing Yang. Journal of Genetics and Genomics. 2016(05)
[7]水稻小粒基因SG4(D11等位基因)的克隆和功能研究(英文)[J]. 石珍源,饒玉春,徐杰,胡時開,方云霞,余海萍,潘江杰,劉瑞芳,任德勇,王小虎,祝陽舟,朱麗,董國軍,張光恒,曾大力,郭龍彪,胡江,錢前. Science Bulletin. 2015(10)
[8]GS6, A Member of the GRAS Gene Family,Negatively Regulates Grain Size in Rice[J]. Lianjun Sun,Xiaojiao Li,Yongcai Fu,Zuofeng Zhu,Lubin Tan,Fengxia Liu,Xianyou Sun,Xuewen Sun,Chuanqing Sun. Journal of Integrative Plant Biology. 2013(10)
[9]Toward understanding genetic mechanisms of complex traits in rice[J]. Wei Hao, Hong-Xuan Lin* National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China. 遺傳學報. 2010(10)
本文編號:3032729
【文章來源】:華僑大學福建省
【文章頁數(shù)】:143 頁
【學位級別】:博士
【部分圖文】:
水稻油菜素內(nèi)酯相關基因研究網(wǎng)絡(Tong,2018)
D26基因分別從水稻秈稻明恢86和D26突變體的c DNA中擴增獲得全長,片段回收與pMD18-T連接、測序比對分析;パa實驗載體構建:一個含有D26基因啟動子、c DNA全長和3"UTR非編碼區(qū)3563 bp全長片段從中間載體p UPGWPR上由HindIII/Eco RV酶切,與Bam HI酶切p CAMBIA1300載體分別回收,兩片段經(jīng)平端連接,最終構建互補載體p CAMBIAGWP26(見圖1)。2.2.8 植物葉片總RNA提取-TRIzol法
轉(zhuǎn)錄組測序流程
【參考文獻】:
期刊論文
[1]Brassinosteroid-regulated plant growth and development and gene expression in soybean[J]. Wenchao Yin,Nana Dong,Mei Niu,Xiaoxing Zhang,Lulu Li,Jun Liu,Bin Liu,Hongning Tong. The Crop Journal. 2019(03)
[2]OsIDD2, a zinc finger and INDETERMINATE DOMAIN protein, regulates secondary cell wall formation[J]. Peng Huang,Hideki Yoshida,Kenji Yano,Shunsuke Kinoshita,Kyosuke Kawai,Eriko Koketsu,Masako Hattori,Sayaka Takehara,Ji Huang,Ko Hirano,Reynante Lacsamana Ordonio,Makoto Matsuoka,Miyako Ueguchi-Tanaka. Journal of Integrative Plant Biology. 2018(02)
[3]A zinc finger protein, interacted with cyclophilin,affects root development via IAA pathway in rice[J]. Peng Cui,Hongbo Liu,Songlin Ruan,Basharat Ali,Rafaqat Ali Gill,Huasheng Ma,Zhifu Zheng,Weijun Zhou. Journal of Integrative Plant Biology. 2017(07)
[4]OsGRF4 controls grain shape, panicle length and seed shattering in rice[J]. Pingyong Sun,Wuhan Zhang,Yihua Wang,Qiang He,Fu Shu,Hai Liu,Jie Wang,Jianmin Wang,Longping Yuan,Huafeng Deng. Journal of Integrative Plant Biology. 2016(10)
[5]Rapid improvement of grain weight via highly efficient CRISPR/Cas9-mediated multiplex genome editing in rice[J]. Rongfang Xu,Yachun Yang,Ruiying Qin,Hao Li,Chunhong Qiu,Li Li,Pengcheng Wei,Jianbo Yang. Journal of Genetics and Genomics. 2016(08)
[6]TALEN-Mediated Homologous Recombination Produces Site-Directed DNA Base Change and Herbicide-Resistant Rice[J]. Ting Li,Bo Liu,Chih Ying Chen,Bing Yang. Journal of Genetics and Genomics. 2016(05)
[7]水稻小粒基因SG4(D11等位基因)的克隆和功能研究(英文)[J]. 石珍源,饒玉春,徐杰,胡時開,方云霞,余海萍,潘江杰,劉瑞芳,任德勇,王小虎,祝陽舟,朱麗,董國軍,張光恒,曾大力,郭龍彪,胡江,錢前. Science Bulletin. 2015(10)
[8]GS6, A Member of the GRAS Gene Family,Negatively Regulates Grain Size in Rice[J]. Lianjun Sun,Xiaojiao Li,Yongcai Fu,Zuofeng Zhu,Lubin Tan,Fengxia Liu,Xianyou Sun,Xuewen Sun,Chuanqing Sun. Journal of Integrative Plant Biology. 2013(10)
[9]Toward understanding genetic mechanisms of complex traits in rice[J]. Wei Hao, Hong-Xuan Lin* National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China. 遺傳學報. 2010(10)
本文編號:3032729
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