采用基于高分辨率熔解曲線技術的SNP標記定位徐州142無絮的短絨控制基因
發(fā)布時間:2018-06-18 23:01
本文選題:陸地棉 + 高分辨率熔解曲線; 參考:《棉花學報》2017年01期
【摘要】:【目的】定位徐州142無絮(XZ142w)突變體的短絨控制基因n2!痉椒ā恳躁懙孛(Gossypium hirsutum L.)徐州142(XZ142)×XZ142w的F2群體為研究對象,利用108個簡單重復序列(Simple sequence repeat,SSR)標記對n2進行初步定位,再根據(jù)2個親本材料中有單核苷酸多態(tài)性(Single nucleotide polymorphic,SNP)的差異基因設計50對SNP引物,用高分辨率熔解曲線(High resolution melting,HRM)技術從中篩選在親本間有多態(tài)性的SNP引物,并用于后代的基因分型!窘Y果】利用108個SSR標記將n2初步定位在26號染色體的20.2c M的遺傳區(qū)間內;用HRM技術篩選到9對親本間有多態(tài)性的SNP引物,成功實現(xiàn)基因分型;并結合以SSR構建的連鎖圖譜,將n2的遺傳區(qū)間縮小為19.5 c M,n2與最近的SNP標記Cricaas20158遺傳距離為5.5 c M,且遺傳圖譜上的標記與四倍體陸地棉測序物理圖譜基本一致!窘Y論】HRM技術可用于棉花中的SNP檢測和n2基因的定位。
[Abstract]:[objective] to localize the short velvet control gene n22.Methods to localize the XZ142w mutant of Xuzhou 142, Gossypium hirsutum L. The F2 population of Xuzhou 142XZ142w 脳 XZ142w was preliminarily located by 108 simple sequence repeats markers, and 50 pairs of SNPs were designed according to the single nucleotide polymorphisms single nucleotide polymorphism (SNPs) in two parents. High resolution fusion curve (HRM) technique was used to screen polymorphic primers from parents and to be used for genotyping of progeny. [results] using 108 SSR markers, N2 was preliminarily located in the genetic interval of 20.2cm on chromosome 26. Nine pairs of SNP primers with polymorphism between parents were screened by HRM technique, and the genotyping was successfully achieved, and the linkage map constructed by SSR was used. The genetic interval of n2 was reduced to 19.5c Mn2 and the genetic distance of Cricaas20158, a recent SNP marker, was 5.5 cm, and the markers on the genetic map were basically consistent with the physical map of tetraploid upland cotton sequencing. [conclusion] HRM technique can be used in cotton. Detection of SNP and mapping of N2 gene.
【作者單位】: 中國農業(yè)科學院棉花研究所/棉花生物學國家重點實驗室;
【基金】:國家863計劃(2013AA102601-01-14) 國家科技支撐計劃(2014BAD03B01)
【分類號】:S562
【參考文獻】
相關期刊論文 前2條
1 唐立群;肖層林;王偉平;;SNP分子標記的研究及其應用進展[J];中國農學通報;2012年12期
2 宋麗;郭旺珍;秦鴻德;丁業(yè)掌;張?zhí)煺?;棉花光子基因N_1和n_2的遺傳分析及染色體定位的分子證據(jù)[J];南京農業(yè)大學學報;2010年01期
【共引文獻】
相關期刊論文 前10條
1 謝三磊;文鳳云;李俊強;王晴;梁鈺;劉藝婷;李磊;陳藝;;黑羽鵪鶉ESRβ基因外顯子多態(tài)性及其與產蛋性狀的相關性分析[J];中國畜牧獸醫(yī);2016年12期
2 韓俊杰;王昊龍;李詠;蔡曼;李衛(wèi)華;;小麥淀粉合成相關酶基因SSⅡa、SBEⅡa和SBEⅡb表達序列多態(tài)性及對淀粉質量分數(shù)的影響[J];西北農業(yè)學報;2016年08期
3 馮曉旭;鄒長松;陸才瑞;程海亮;張友平;Mkulama A P Mtawa;王巧連;宋國立;;與亞洲棉光籽突變體DPL972中光籽基因緊密連鎖的SSR分子標記的開發(fā)與應用(英文)[J];棉花學報;2016年04期
4 李京;張祥林;王,
本文編號:2037160
本文鏈接:http://sikaile.net/kejilunwen/jiyingongcheng/2037160.html
最近更新
教材專著