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浙江沿海魚(yú)類DNA條形碼及其在魚(yú)卵仔魚(yú)鑒定中的應(yīng)用

發(fā)布時(shí)間:2018-05-24 23:24

  本文選題:魚(yú)卵 + 仔稚魚(yú) ; 參考:《浙江海洋大學(xué)》2017年碩士論文


【摘要】:浙江沿海漁業(yè)資源豐富,是多種海洋經(jīng)濟(jì)魚(yú)類的產(chǎn)卵場(chǎng)和其仔稚魚(yú)索餌場(chǎng)。眾所周知魚(yú)卵和仔魚(yú)是重要的漁業(yè)補(bǔ)充資源,它們的數(shù)量和保護(hù)情況以及所處的生態(tài)環(huán)境直接影響了成魚(yú)的資源量。本研究探討應(yīng)用DNA條形碼技術(shù)對(duì)魚(yú)卵和仔魚(yú)進(jìn)行分類鑒定,了解浙江沿海水域產(chǎn)卵區(qū)的物種組成,為漁業(yè)管理者提供幫助。主要研究?jī)?nèi)容如下:1.成魚(yú)樣品采集了來(lái)自浙江舟山、登步、桃花、六橫、蝦峙、朱家尖、岱山、小長(zhǎng)涂、大長(zhǎng)涂、衢山、泗礁和枸杞島等島嶼以及蒼南沿海海域的樣本。采集時(shí)間為2011年-2014夏天,捕撈方法為近海捕魚(yú)船和近海定點(diǎn)漁網(wǎng)。一共鑒定出71種海洋魚(yú)類,隸屬于8目25科。基于COI序列與Genbak數(shù)據(jù)庫(kù)比對(duì),相似度達(dá)到98%以上的有65種,可以鑒定到種的水平。相似度在92%-98%的有3種,可以鑒定到屬的水平。剩余3種相似度低于92%。2.魚(yú)卵仔魚(yú)樣品收集于2014年5月-2015年11月,在浙江沿海水域租用漁船采用大型浮游生物網(wǎng)(網(wǎng)長(zhǎng)280cm、網(wǎng)口內(nèi)徑80cm、網(wǎng)口面積0.5m2網(wǎng)目0.5mm、拖速2海里/h、拖網(wǎng)時(shí)間10分鐘)。通過(guò)形態(tài)學(xué)初步鑒定,可以鑒定到科的占樣品總數(shù)的16.9%,鑒定到種的占1.4%。通過(guò)Genbank數(shù)據(jù)庫(kù)比對(duì),結(jié)果顯示從73個(gè)樣本序列中一共鑒定出21個(gè)魚(yú)類物種,分屬于9個(gè)科。其中相似度達(dá)到98%以上的有67個(gè)樣品19種,可以鑒定到種的比例達(dá)到91.8%。相似度達(dá)到83%到92%的有6個(gè)樣品2種,可以鑒定到科的比例為100%。DNA條形碼技術(shù)是傳統(tǒng)形態(tài)學(xué)強(qiáng)有力的補(bǔ)充,可以很好的輔助形態(tài)學(xué),并驗(yàn)證形態(tài)學(xué)鑒定結(jié)果。它是一種準(zhǔn)確的,規(guī)范化的,有效的物種鑒定工具,在魚(yú)類生物多樣性研究中具有廣闊的應(yīng)用前景。3.通過(guò)分析COI DNA序列種內(nèi)平均K-2-P遺傳距離0.56%,屬內(nèi)種間平均遺傳距離9.19%,科內(nèi)屬間平均遺傳距離21.72%,目?jī)?nèi)科間平均遺傳距離25.25%,表明種內(nèi)距離遠(yuǎn)小于種間距離,與絕大多數(shù)條形碼研究結(jié)果一致。基于魚(yú)卵仔魚(yú)COI序列構(gòu)建的系統(tǒng)發(fā)育樹(shù)顯示結(jié)果與形態(tài)學(xué)方法構(gòu)建的成魚(yú)系統(tǒng)進(jìn)化關(guān)系一致,說(shuō)明DNA條形碼技術(shù)可以應(yīng)用于魚(yú)卵仔魚(yú)的分類鑒定。
[Abstract]:Zhejiang is rich in fishery resources, which is the oviposition of many kinds of marine economic fish and the bait field of their larvae and juveniles. It is well known that fish eggs and larvae are important supplementary fishery resources. Their quantity and protection and ecological environment have a direct impact on the amount of adult fish resources. In this study, DNA barcode technique was used to classify and identify fish eggs and larvae, to understand the species composition of spawning areas in Zhejiang coastal waters, and to provide assistance to fishery managers. The main research contents are as follows: 1. Adult fish samples were collected from Zhoushan, Zhejiang Province, Dengbu, Taohua, Liuheng, Xianzhi, Zhu Jiajian, Daishan, Xiaochangtu, Dachang Tuo, Ququ Mountain, Sijiao and Lycium Island, as well as the coastal waters of Cangnan. The collection time is 2011-2014 summer, the fishing method is the offshore fishing vessel and the offshore fixed point fishing net. A total of 71 species of marine fish belonging to 25 families of 8 orders were identified. Based on the alignment of COI sequence and Genbak database, there are 65 species whose similarity is above 98%, which can be identified at the level of species. There are 3 species with similarity between 92% and 98%, which can be identified to the level of genus. The remaining 3 kinds of similarity are less than 92. 2. Fish eggs were collected from May 2014 to November 2015. Large plankton nets (net length 280 cm, net diameter 80 cm, net area 0.5m2 mesh 0.5 mm, drag speed 2 nautical miles / h, trawl time 10 minutes) were used to hire fishing vessels in coastal waters of Zhejiang Province (net length 280 cm, net diameter 80 cm, net area 0.5 mm, drag speed 2 nautical miles / h, trawl time 10 minutes). According to the preliminary morphological identification, 16.9% of the total samples of the family and 1.4% of the species can be identified. The results of Genbank database alignment showed that 21 fish species belonging to 9 families were identified from 73 sample sequences. Among them, there are 67 samples with more than 98% similarity, and the proportion of identified species is 91.8%. There are 6 samples with similarity of 83% to 92%. The proportion of 100%.DNA bar code can be identified as a powerful supplement to traditional morphology, which can be used to assist morphology and verify the results of morphological identification. It is an accurate, standardized and effective tool for species identification, and has a broad application prospect in the study of fish biodiversity. The average genetic distance of K-2-P in COI DNA sequence was 0.56, the average genetic distance among intra species was 9.19, the average genetic distance among Kone genera was 21.72, and the average genetic distance among orders was 25.25. The results showed that the average genetic distance within species was much smaller than that between species. The results are consistent with the results of most bar code studies. The results of phylogenetic tree constructed based on COI sequence were consistent with the phylogenetic relationship of adult fish constructed by morphological method, which indicated that DNA barcode technique could be applied to the classification and identification of larvae.
【學(xué)位授予單位】:浙江海洋大學(xué)
【學(xué)位級(jí)別】:碩士
【學(xué)位授予年份】:2017
【分類號(hào)】:S917.4

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