基于CRISPR/Cas9技術(shù)的水稻W(wǎng)RKY28突變體創(chuàng)制及其基因的抗病功能探索
發(fā)布時間:2021-09-09 20:14
水稻是世界上超過一半的人口的主要糧食作物,而由黃單胞桿菌水稻變種(Xanthomonas oryzae pv.oryzaae,Xoo)引起的水稻白葉枯。˙acterial blight,BB)是影響其產(chǎn)量的主要病害之一。WRKY轉(zhuǎn)錄因子是與植物抗病密切相關(guān)的轉(zhuǎn)錄因子,對其研究不僅有助于我們了解植物抗病防御反應(yīng)機(jī)制,并且能為傳統(tǒng)育種和基因工程育種提供基因資源和相關(guān)理論指導(dǎo)。本實(shí)驗(yàn)室前期研究中,發(fā)現(xiàn)一個抗病相關(guān)基因OsWRKY28。此外,近年來,CRISPR/Cas9系統(tǒng)因其定點(diǎn)突變效率高被成功運(yùn)用于多種物種的基因編輯中。本研究圍繞測試改造后的CRISPR/Cas9系統(tǒng)效率和分析OsWRKY28基因的功能展開,研究的內(nèi)容主要如下:1.CRISPR/Cas9載體改造及應(yīng)用其編輯水稻D3基因以測試效率以現(xiàn)有水稻CRISPR/Cas9載體系統(tǒng)為起點(diǎn),優(yōu)化改造了相應(yīng)的載體及其構(gòu)建方法,實(shí)現(xiàn)了兩步法構(gòu)建基因編輯載體。利用新的載體和方法,針對水稻日本晴(Oryza sativa L.spp.Japonicaa cv.Nipponbare)D3 基因的 3 個靶向位點(diǎn)分別構(gòu)建了相應(yīng)的CRISPR/Ca...
【文章來源】:浙江師范大學(xué)浙江省
【文章頁數(shù)】:112 頁
【學(xué)位級別】:碩士
【部分圖文】:
圖2.3水稻歷基因結(jié)構(gòu)及CRISPR/Cas9靶位點(diǎn)示意圖??
校遙?茫幔螅乖靨逵嘔?壩τ悶潯嗉??荊冢諄?潁崳?方式Mutantl為缺失八個堿基(CAGTTGCG);總突變率為29.23%,共產(chǎn)生11種??突變。具體突變方式如圖2.4所示。??A?DDRCK11/31)??CKiACiTACiACTnC'GCCCATCKiCGG?WT??GGACiTA(iAC(nC(jCCC—(KiCGG?Mutant?1??CKiAGTACiACGRXiCCC-TCKiCGG?Mutani2??(iCiACnA(iAC(iTC(iCCCATT(iGCGG?Mutant???CiGAGTACiACCiTCCiCCCAGTCiGCGG?Mutant4??GGAG1AGACG1CGCCCAATGGCGG?Muianl5??B?DDRC2(6/24)??CCCTUCA(iT(;TT(;CAAAT(iGCAC?WT??CCCTGCAG1CJ?CAAATGGCAC?Mulant?1??CCC1GC?CT1?TOCAAArGGCAC?Minain2??CCCTGC?AGT—TGC?AAATGGC?AC?Muiani???CCCTGCAG—TT('jCAAAT(}(iCAC?Mmam4??CCCTGCA?TGC?AAATGGC?AC?Mutant???C?DDRC3(2/10)??GCGGGAC'AIGC'AGTTGCGGGAGG?WT??('.CCKKJACATG?GC5AGG?Muianl?1??圖2.4?TQ代轉(zhuǎn)基因植株具體突變類型??Figure?2.4?The?mutation?type?of?T〇?transgenic?lines??圖中綠色序列表示PAM位點(diǎn)
?:?t?HI??Amaa/V\a/\A?m/W\??圖2.5?T,代轉(zhuǎn)基因植株的測序結(jié)果??Figure?2.5?The?sequencing?result?of?Tj?transgenic?lines??圖A為株系a:DDRCl(Mutantl)純合突變植株al、a2的測序結(jié)果;圖B為株系??b:DDRCl(Mutant3)純合突變植株bl的測序結(jié)果;圖C為株系c:DDRC2(Mutant2)純合突變??植株cl的測序結(jié)果;圖D為株系d:DDRC3(Mutantl)純合突變植株dl、d2的測序結(jié)果。??A,?the?sequencing?result?of?the?homozygous?mutant?plants?aland?a2?of?the?DDRC1?(Mutant?1);?B,??the?sequencing?result?of?the?homozygous?mutant?plant?bl?of?DDRCl(Mutant3);?C,?the?sequencing??result?of?the?homozygous?mutant?plant?cl?of?DDRC2(Mutant2);?D,?the?sequencing?result?of?the??homozygous?mutant?plants?dland?d2?of?DDRC3(Mutantl).??2.3.3轉(zhuǎn)基因水稻突變體植株表型鑒定??如表2.4與圖2.7所示,3周齡乃代純合突變植株中,al、a2對應(yīng)的的靶位??點(diǎn)為DDRC1,突變方式為缺失兩個堿基(AT),與野生型日本晴相比,株高及分??蘗數(shù)都沒有明顯變化;bl對應(yīng)的靶位點(diǎn)為DDRC1
【參考文獻(xiàn)】:
期刊論文
[1]枸杞WRKY3基因克隆及組織表達(dá)分析[J]. 徐惠娟,鄭蕊,陳任,王彥才,王麗娟. 西北植物學(xué)報(bào). 2016(09)
[2]水稻白葉枯病再流行原因分析與防控對策研究[J]. 沈穎,王華弟,李仲惺,葉建人,趙敏. 中國農(nóng)學(xué)通報(bào). 2016(24)
[3]普通小麥轉(zhuǎn)錄因子基因TaWRKY35的克隆及功能分析[J]. 劉自成,苗麗麗,王景一,楊德龍,毛新國,景蕊蓮. 中國農(nóng)業(yè)科學(xué). 2016(12)
[4]水稻白葉枯病發(fā)生危害損失動態(tài)與模型預(yù)測的探討[J]. 王華弟,沈穎,趙敏,葉建人,黃賢夫,李仲惺. 中國植保導(dǎo)刊. 2016(04)
[5]Targeted Mutagenesis in Zea mays Using TALENs and the CRISPR/Cas System[J]. Zhen Liang,Kang Zhang,Kunling Chen,Caixia Gao. Journal of Genetics and Genomics. 2014(02)
[6]Research Progress on Functional Analysis of Rice WRKY Genes[J]. SONG Yu1,2,AI Chong-rui1,JING Shao-juan1,2,YU Di-qiu1 (1Key Laboratory of Tropical Forest Ecology,Xishuangbanna Tropical Botanical Garden,Chinese Academy of Sciences,Kunming 650223,China;2Graduate School of the Chinese Academy of Sciences,Bejing 100049,China). Rice Science. 2010(01)
[7]中國雜交水稻白葉枯病抗性的遺傳改良[J]. 章琦. 中國水稻科學(xué). 2009(02)
[8]稻瘟菌誘導(dǎo)的水稻W(wǎng)RKY基因OsWRKY52的分離和鑒定(英文)[J]. 王海華,謝科,吳坤陸,郭澤建. 生物化學(xué)與生物物理進(jìn)展. 2005(10)
[9]OsWRKY03, a rice transcriptional activator that functions in defense signaling pathway upstream of OsNPR1[J]. Xiao Qiang LIU1,2, Xian Quan BAI1,2, Qian QIAN3, Xiu Jie WANG1, Ming Sheng CHEN1, Cheng Cai CHU1,* 1National Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China 2Graduate School of the Chinese Academy of Sciences, Yuquan Road, Beijing 100039, China 3China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310006, China. Cell Research. 2005(08)
[10]植物轉(zhuǎn)錄因子與基因調(diào)控[J]. 李潔. 生物學(xué)通報(bào). 2004(03)
本文編號:3392716
【文章來源】:浙江師范大學(xué)浙江省
【文章頁數(shù)】:112 頁
【學(xué)位級別】:碩士
【部分圖文】:
圖2.3水稻歷基因結(jié)構(gòu)及CRISPR/Cas9靶位點(diǎn)示意圖??
校遙?茫幔螅乖靨逵嘔?壩τ悶潯嗉??荊冢諄?潁崳?方式Mutantl為缺失八個堿基(CAGTTGCG);總突變率為29.23%,共產(chǎn)生11種??突變。具體突變方式如圖2.4所示。??A?DDRCK11/31)??CKiACiTACiACTnC'GCCCATCKiCGG?WT??GGACiTA(iAC(nC(jCCC—(KiCGG?Mutant?1??CKiAGTACiACGRXiCCC-TCKiCGG?Mutani2??(iCiACnA(iAC(iTC(iCCCATT(iGCGG?Mutant???CiGAGTACiACCiTCCiCCCAGTCiGCGG?Mutant4??GGAG1AGACG1CGCCCAATGGCGG?Muianl5??B?DDRC2(6/24)??CCCTUCA(iT(;TT(;CAAAT(iGCAC?WT??CCCTGCAG1CJ?CAAATGGCAC?Mulant?1??CCC1GC?CT1?TOCAAArGGCAC?Minain2??CCCTGC?AGT—TGC?AAATGGC?AC?Muiani???CCCTGCAG—TT('jCAAAT(}(iCAC?Mmam4??CCCTGCA?TGC?AAATGGC?AC?Mutant???C?DDRC3(2/10)??GCGGGAC'AIGC'AGTTGCGGGAGG?WT??('.CCKKJACATG?GC5AGG?Muianl?1??圖2.4?TQ代轉(zhuǎn)基因植株具體突變類型??Figure?2.4?The?mutation?type?of?T〇?transgenic?lines??圖中綠色序列表示PAM位點(diǎn)
?:?t?HI??Amaa/V\a/\A?m/W\??圖2.5?T,代轉(zhuǎn)基因植株的測序結(jié)果??Figure?2.5?The?sequencing?result?of?Tj?transgenic?lines??圖A為株系a:DDRCl(Mutantl)純合突變植株al、a2的測序結(jié)果;圖B為株系??b:DDRCl(Mutant3)純合突變植株bl的測序結(jié)果;圖C為株系c:DDRC2(Mutant2)純合突變??植株cl的測序結(jié)果;圖D為株系d:DDRC3(Mutantl)純合突變植株dl、d2的測序結(jié)果。??A,?the?sequencing?result?of?the?homozygous?mutant?plants?aland?a2?of?the?DDRC1?(Mutant?1);?B,??the?sequencing?result?of?the?homozygous?mutant?plant?bl?of?DDRCl(Mutant3);?C,?the?sequencing??result?of?the?homozygous?mutant?plant?cl?of?DDRC2(Mutant2);?D,?the?sequencing?result?of?the??homozygous?mutant?plants?dland?d2?of?DDRC3(Mutantl).??2.3.3轉(zhuǎn)基因水稻突變體植株表型鑒定??如表2.4與圖2.7所示,3周齡乃代純合突變植株中,al、a2對應(yīng)的的靶位??點(diǎn)為DDRC1,突變方式為缺失兩個堿基(AT),與野生型日本晴相比,株高及分??蘗數(shù)都沒有明顯變化;bl對應(yīng)的靶位點(diǎn)為DDRC1
【參考文獻(xiàn)】:
期刊論文
[1]枸杞WRKY3基因克隆及組織表達(dá)分析[J]. 徐惠娟,鄭蕊,陳任,王彥才,王麗娟. 西北植物學(xué)報(bào). 2016(09)
[2]水稻白葉枯病再流行原因分析與防控對策研究[J]. 沈穎,王華弟,李仲惺,葉建人,趙敏. 中國農(nóng)學(xué)通報(bào). 2016(24)
[3]普通小麥轉(zhuǎn)錄因子基因TaWRKY35的克隆及功能分析[J]. 劉自成,苗麗麗,王景一,楊德龍,毛新國,景蕊蓮. 中國農(nóng)業(yè)科學(xué). 2016(12)
[4]水稻白葉枯病發(fā)生危害損失動態(tài)與模型預(yù)測的探討[J]. 王華弟,沈穎,趙敏,葉建人,黃賢夫,李仲惺. 中國植保導(dǎo)刊. 2016(04)
[5]Targeted Mutagenesis in Zea mays Using TALENs and the CRISPR/Cas System[J]. Zhen Liang,Kang Zhang,Kunling Chen,Caixia Gao. Journal of Genetics and Genomics. 2014(02)
[6]Research Progress on Functional Analysis of Rice WRKY Genes[J]. SONG Yu1,2,AI Chong-rui1,JING Shao-juan1,2,YU Di-qiu1 (1Key Laboratory of Tropical Forest Ecology,Xishuangbanna Tropical Botanical Garden,Chinese Academy of Sciences,Kunming 650223,China;2Graduate School of the Chinese Academy of Sciences,Bejing 100049,China). Rice Science. 2010(01)
[7]中國雜交水稻白葉枯病抗性的遺傳改良[J]. 章琦. 中國水稻科學(xué). 2009(02)
[8]稻瘟菌誘導(dǎo)的水稻W(wǎng)RKY基因OsWRKY52的分離和鑒定(英文)[J]. 王海華,謝科,吳坤陸,郭澤建. 生物化學(xué)與生物物理進(jìn)展. 2005(10)
[9]OsWRKY03, a rice transcriptional activator that functions in defense signaling pathway upstream of OsNPR1[J]. Xiao Qiang LIU1,2, Xian Quan BAI1,2, Qian QIAN3, Xiu Jie WANG1, Ming Sheng CHEN1, Cheng Cai CHU1,* 1National Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China 2Graduate School of the Chinese Academy of Sciences, Yuquan Road, Beijing 100039, China 3China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310006, China. Cell Research. 2005(08)
[10]植物轉(zhuǎn)錄因子與基因調(diào)控[J]. 李潔. 生物學(xué)通報(bào). 2004(03)
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