番茄HD-Zip轉錄因子家族生物信息學分析及HD-ZipⅠ亞族抗逆相關基因鑒定分析
[Abstract]:With the continuous expansion of tomato planting scale, high salt, drought, low temperature, pathogenic bacteria and other abiotic and biological stresses have caused serious harm to the growth and production of tomato. So far, a large number of studies have shown that plant transcription factors play an important role in plant adaptation and resistance to various abiotic and biological stresses. In recent years, the study of different family of transcription factors in plants has been more and more in-depth. HD-Zip is a unique transcription factor in plants, which is involved in a variety of biological functions of plants, especially plays an important role in regulating the response of plants under abiotic stress. In this study, the HD-Zip transcription factor gene family of tomato was analyzed by bioinformatics, and the members of tomato HDZip protein family were classified, physicochemical characteristics, conserved region, gene structure, chromosome distribution, secondary and tertiary structure. At the same time, the tissue specificity of tomato HD-Zip I subfamily and the expression pattern under abiotic stress were analyzed, and the gene silencing analysis of two genes with obvious response was carried out. It provides a theoretical basis for the study of the regulatory function of tomato HD-Zip gene family in abiotic stress response. The main results are as follows: a total of 58 members (Sl HZ1-Sl HZ58) of tomato HD-Zip transcription factor family were identified, which were divided into SlHD-Zip I-IV subfamily. These genes were unevenly distributed on 12 chromosomes. The amplification mode of tomato HD-Zip gene was mainly fragment replication, the secondary structure of family members was mainly spiral, and the tertiary structure was similar. The tissue specific expression of 15 genes of HD-Zip I subfamily was analyzed. the results showed that these members were expressed in roots, stems, leaves, flowers and fruits to varying degrees. Most genes can be expressed in roots, while Sl HZ30 genes can only be expressed in flowers. In stress analysis, 14 genes were up-regulated and 1 gene (SlHZ14) was down-regulated under salt stress. In drought treatment, 13 genes were up-regulated and 2 genes (Sl HZ14 and SlHZ28) were down-regulated. The expression of all 15 genes was up-regulated in low temperature treatment, and the up-regulation of SlHZ13 gene was the most significant. VIGS gene silencing analysis of genes SlHZ11 and SlHZ15 with significant changes in stress response analysis was carried out. It was found that after SlHZ11 and SlHZ15 gene silencing, the MDA index of plants under salt and drought stress was significantly higher than that of normal plants under the same conditions, which indicated that the down-regulated expression of SlHZ11 gene could decrease the salt tolerance and drought resistance of plants.
【學位授予單位】:東北農業(yè)大學
【學位級別】:碩士
【學位授予年份】:2017
【分類號】:S641.2
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