計(jì)算機(jī)模擬不對(duì)稱鈾酰-Salophen配合物分子識(shí)別性能的研究
本文選題:密度泛函理論 + 不對(duì)稱鈾酰-salophen ; 參考:《南華大學(xué)》2016年碩士論文
【摘要】:實(shí)驗(yàn)中很難通過(guò)提純得到純凈的鈾酰-salophen,所以實(shí)驗(yàn)方法很難得到分子的一些特性參數(shù),也很難得到鈾酰-salophen與其他分子之間發(fā)生相互作用形成的復(fù)合物的一些特征參數(shù),但是通過(guò)理論計(jì)算,可以很好地解決這個(gè)問(wèn)題,理論計(jì)算可以得到鈾酰-salophen及形成的復(fù)合物的紅外光譜,幾何構(gòu)型,分子軌道,電子結(jié)構(gòu)等數(shù)據(jù)參數(shù)。根據(jù)鈾酰-salophen結(jié)構(gòu)特征,在鈾酰-salophen的一側(cè)引入芳香基,使鈾酰-salophen具有分子手性,所以本文基于理論計(jì)算,在分子水平上對(duì)鈾酰-salophen、鈾酰-salophen衍生物及其與其他分子形成的復(fù)合物進(jìn)行研究特殊的分子結(jié)構(gòu)。利用DFT的計(jì)算方法,理論上計(jì)算了三種鈾酰-salophen受體與客體小分子之間的結(jié)合能力。計(jì)算結(jié)果表明,受體與客體通過(guò)鈾原子(U)與氧原子(O3)的配位作用結(jié)合一起,且結(jié)合能力隨著受體上取代基的增大而增大;不對(duì)稱的受體的鈾原子(U)與客體氧原子(O3)形成的鈾氧鍵(U-O3)的穩(wěn)定性大于相應(yīng)的對(duì)稱的受體與客體之間的鈾氧鍵(U-O3)的穩(wěn)定性;配位后客體小分子上的碳碳鍵(C=C)與碳氧鍵(C=O)之間的電子密度減弱。通過(guò)計(jì)算受體3與一對(duì)手性分子之間的結(jié)合能及單體與復(fù)合物的CD光譜,得出受體3對(duì)手性分子的選擇性是有區(qū)別的。據(jù)上述分析不對(duì)稱鈾酰-salophen具有分子識(shí)別能力。關(guān)于鈾酰-salophen與其他分子形成氫鍵的報(bào)道很少,尤其鈾酰-salophen中的鈾酰上的兩個(gè)氧原子參與形成的氫鍵鮮有報(bào)道,所以我們根據(jù)鈾酰-salophen分子上的原子的特點(diǎn),進(jìn)一步從理論模擬了不對(duì)稱鈾酰-salophen中C-O和U=O的氧原子與四氫吡咯之間氫鍵情況,所以采用上述計(jì)算方法,對(duì)鈾酰-salophen與四氫吡咯及水分子之間形成的氫鍵進(jìn)行了理論計(jì)算及分析.結(jié)果表明體系1和體系2中的氫鍵鍵長(zhǎng)都小于2.28?,鍵角都在160°~178°之間,體系1中salophen的O1與四氫吡咯上的H1之間的氫鍵相互作用能EHB=-10.658 kJ/mol,在體系2中鈾酰的O3與四氫吡咯上的H3及O1與H1之間的氫鍵相互作用能分別為EHB=-7.989 kJ/mol、EHB=-11.114 kJ/mol,鈾酰-salophen中的C-O和U=O均可與四氫吡咯形成氫鍵,且C-O···H-N穩(wěn)定性大于U=O···H-N.為設(shè)計(jì)基于鈾配合物的分子組裝及與其他分子形成氫鍵的實(shí)驗(yàn)研究提供方理論指導(dǎo)。
[Abstract]:It is difficult to obtain pure uranyl -salophen by purification in the experiment, so it is difficult to get some characteristic parameters of the molecule and some characteristic parameters of the complex formed by the interaction between uranyl -salophen and other molecules. However, the theoretical calculation can solve the problem well, and the theoretical calculation can be obtained. In order to obtain the infrared spectra, geometric configuration, molecular orbitals and electronic structures of uranyl -salophen and its complex, according to the structure characteristics of uranyl -salophen, the aromatic group was introduced on one side of uranyl -salophen to make uranyl -salophen molecular chirality, so based on the theoretical calculation, at the molecular level, the uranyl -salophen was on the molecular level. The specific molecular structure of uranyl -salophen derivatives and their complexes formed with other molecules is studied. The binding ability of three uranyl -salophen receptors to small molecules of the guest is calculated by DFT calculation. The results show that the receptor and the object bind to the coordination of uranium atom (U) with oxygen atom (O3). The stability of the uranium oxygen bond (U-O3) formed by the uranium atom (U) of the asymmetric receptor and the guest oxygen atom (O3) is greater than that of the corresponding symmetric receptor and guest uranium oxygen bond (U-O3), and between the carbon carbon bond (C=C) and the carbon oxygen bond (C=O) on the small molecule after the coordination. The electron density is weakened. By calculating the binding energy between the receptor 3 and a pair of chiral molecules and the CD spectra of the monomers and complexes, the selectivity of the receptor 3 is distinguished. According to the above analysis, the asymmetric uranyl -salophen has the ability to identify the molecules. The reports of the hydrogen bonds formed by uranyl -salophen and other molecules are rarely reported. The hydrogen bonds formed by two oxygen atoms in the uranyl -salophen are rarely reported. So we further theoretically simulated the hydrogen bond between the oxygen atoms of C-O and U=O in the unsymmetrical uranyl -salophen and the four hydrogen pyrrole in the asymmetric uranyl -salophen by the characteristics of the atoms on the uranyl -salophen molecule, so the above calculation method was used for uranyl -sal. The hydrogen bond formed between ophen and four hydrogen pyrrole and water molecules has been theoretically calculated and analyzed. The results show that the hydrogen bond length of the system 1 and system 2 is less than 2.28? The bond angle is between 160 and ~178 degrees. The hydrogen bond interaction between O1 and H1 on the four pyrrole in system 1 can be EHB=-10.658 kJ/mol, and the O3 of uranyl in system 2 The hydrogen bond interaction between H3 and O1 on four pyrrole can be EHB=-7.989 kJ/mol, EHB=-11.114 kJ/mol respectively. C-O and U=O in uranyl -salophen can form hydrogen bonds with four hydrogen pyrrole, and C-O. To guide the theory of the supplier.
【學(xué)位授予單位】:南華大學(xué)
【學(xué)位級(jí)別】:碩士
【學(xué)位授予年份】:2016
【分類號(hào)】:O641.4
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