森林革蜱唾液腺與羊無漿體VirD4和VirB10相互作用分子鑒定及其功能分析
發(fā)布時間:2022-07-15 16:25
羊無漿體(Anapolasma ovis)是一種紅細(xì)胞內(nèi)專性寄生、經(jīng)蜱傳播的革蘭氏陰性病原體,是引起羊無漿體病的病原。該病原在世界范圍分別廣泛,分布范圍包括亞洲、歐洲、非洲和北美等地區(qū)。羊無漿體主要經(jīng)硬蜱傳播,革蜱屬的蜱是其最常見的傳播媒介。VirD4和VirB10是羊無漿體IV型分泌系統(tǒng)(T4SS)的重要組成成分。T4SS系統(tǒng)對細(xì)胞的轉(zhuǎn)運(yùn)、存活和致病起著至關(guān)重要的作用。致病菌常利用T4SS系統(tǒng)直接將毒力因子、DNA和蛋白質(zhì)轉(zhuǎn)運(yùn)到宿主細(xì)胞。為了揭示羊無漿體和森林革蜱(Dermacentor silvarum)的相互作用的分子基礎(chǔ),本研究旨在以羊無漿體VirD4和VirB10構(gòu)建誘餌質(zhì)粒,通過酵母雙雜交系統(tǒng)(Y2H)從森林革蜱的唾液腺cDNA文庫中篩選與病原體蛋白相互作用的宿主蛋白。本研究將森林革蜱唾液腺的cDNA克隆到pGADT7-SmaI載體(捕獲載體)中,構(gòu)建Y2H cDNA文庫。通過對酵母菌Y2H Gold的自激活和毒性試驗(yàn)后,將VirD4和VirB10克隆到pGBKT7載體中構(gòu)建誘餌質(zhì)粒。利用酵母雙雜交篩選,篩選到的陽性質(zhì)粒經(jīng)測序后采用BLAST、Gene Ontology、U...
【文章頁數(shù)】:82 頁
【學(xué)位級別】:博士
【文章目錄】:
博士學(xué)位論文評閱人、答辯委員會簽名表
摘要
abstract
英文縮略表
CHAPTER Ⅰ Introduction
1.Anaplasma ovis biology
1.1 Anaplasma taxonomy and bacteriology
1.2 Genomic structure
1.3 Life cycle of Anaplasma
1.4 Anaplasma infection
2.Veterinary and public health importance
3.Ovine anaplasmosis
3.1 Etiology and distribution
3.2 Signs and symptoms
3.3 Transmission and diagnosis
3.4 Treatment,control and prevention
4.Dermacentor silvarum taxonomy and life cycle
5.Development of Anaplasma in ticks
6. Rationale
CHAPTER Ⅱ Yeast-two-hybrid screening(Y2H)of c DN A library of Dermacentor silvarum salivary gland to identify protein interacting with Vir D4 and Vir B10 of Anaplasma ovis
1.Yeast two-hybrid assay introduction and principle
2.Introduction to Type IV Secretion System(T4SS)
3.Materials and methods
3.1 Reagents
3.2 Research design/Methodology
3.3 Methodology flowchart
4.Bait plasmid construction
4.1 Vir B10 bait construction
4.2 Vir D4 bait construction
4.3 Expression vector p GBKT7
4.4 Gel extraction of Vir D4 and Vir B10 amplified product
4.5 Ligation of Vir B10 and Vir D4 in p GEM T-easy vector
4.6 Transformation into competent cells
4.7 Transfer to LB-agar plates(Amp+)
4.8 Plasmid extraction
4.9 Digestion reaction
4.10 Terminating digestion reaction
4.11 Ligation with T4 DNA ligase
4.12 Transformation into competent cells
4.13 Transfer to LB-agar plates(Kan+)
4.14 PCR confirmation
4.15 Sequence analysis
4.16 Vir D4-p GBKT7 and Vir B10-p GBKT7 plasmid extraction
5.Auto-activation and toxicity tests of bait plasmids
6.Yeast-two-hybrid screening by mating bait with prey
6.1 Y2H screening by Vir D4
6.2 Y2H screening by Vir B10
7.Isolation of the salivary glands from the ticks
8.Construction of yeast two-hybrid c DNA library of salivary glands
9.Preparation of negative and positive control vectors
10.Selection of the positive prey plasmids
10.1 Positive prey analysis
11.Results
11.1 Bait Construction
11.2 Auto-activation and toxicity test of the Vir B10 bait plasmid
11.3 Auto-activation and toxicity test of the Vir D4 bait plasmid
11.4 Transformation of negative and positive controls
11.5 Cons truction of Y2H cDNA library of D .sil varum salivary gland
11.6 Y2H screening and confirmation of the VirB10 interactions
11.7 Sequencing and analysis of Vir B10 positive prey
11.8 Y2H screening and confirmation of the Vir D4 interactions
11.9 Sequencing and analysis of Vir D4 positive preys
CHAPTER Ⅲ Discussion
CHAPTER Ⅳ Graphical summarization
CHAPTER Ⅴ Conclusion
References
Appendices
Appendices1.1 Buffers,media?s and solutions
Appendix1.1.1:PCR master mix
Appendix1.1.2:1XTEA buffer
Appendix1.1.3:1X agarose gel
Appendix1.1.4:LB liquid medium
Appendix1.1.5:LB-agar solid medium
Appendix1.1.6:100 mg/ml ampicillin
Appendix1.1.7:50 mg/ml kanamycin
Appendix1.1.8:1×PBS buffer composition
Appendix1.1.9:1 M IPTG composition
Appendix1.1.10:20 mg/ml X-Gal composition
Appendix1.1.11:20 mg/ml X- α -Gal composition
Appendix1.1.12:Aureobasidin A stock solution
Appendices1.2 Yeast growth media and supplements
Appendix1.2.1:SDO agar plates
Appendix1.2.2:SDO/X agar plates
Appendix1.2.3:SDO/X/A agar plates
Appendix1.2.4:DDO agar plates
Appendix1.2.5:DDO/X agar plates
Appendix1.2.6:DDO/X/A agar plates
Appendix1.2.7:QDO/X/A agar plates
Appendix1.2.8:Freezing medium
Appendix1.2.9:0.5X YPDA broth
Appendix1.2.10:0.5X YPDA broth
Appendices1.3 Yeast handling and plasmid isolation
Appendix1.3.1:1.1X TE/Li Ac solution
Appendix1.3.2:PEG/Li Ac solution
Appendix1.3.3:Preparation of competent yeast cells
Appendix1.3.4:Yeast plasmid isolation protocol
Appendices1.4 Yeast two-hybrid library and screening
Appendix1.4.1:Construction of normalized Y2H AD library
Appendix1.4.2:Y2H library screening using yeast mating
Appendix1.4.3:Y2H library titration
Appendices1.5 Control plasmid information
Appendix1.5.1:Map of p GBKT7-53 DNA-BD control plasmid
Appendix1.5.2:Map of p GADT7-T AD control plasmid
致謝(Acknowledgements)
作者簡歷(Resume)
本文編號:3662412
【文章頁數(shù)】:82 頁
【學(xué)位級別】:博士
【文章目錄】:
博士學(xué)位論文評閱人、答辯委員會簽名表
摘要
abstract
英文縮略表
CHAPTER Ⅰ Introduction
1.Anaplasma ovis biology
1.1 Anaplasma taxonomy and bacteriology
1.2 Genomic structure
1.3 Life cycle of Anaplasma
1.4 Anaplasma infection
2.Veterinary and public health importance
3.Ovine anaplasmosis
3.1 Etiology and distribution
3.2 Signs and symptoms
3.3 Transmission and diagnosis
3.4 Treatment,control and prevention
4.Dermacentor silvarum taxonomy and life cycle
5.Development of Anaplasma in ticks
6. Rationale
CHAPTER Ⅱ Yeast-two-hybrid screening(Y2H)of c DN A library of Dermacentor silvarum salivary gland to identify protein interacting with Vir D4 and Vir B10 of Anaplasma ovis
1.Yeast two-hybrid assay introduction and principle
2.Introduction to Type IV Secretion System(T4SS)
3.Materials and methods
3.1 Reagents
3.2 Research design/Methodology
3.3 Methodology flowchart
4.Bait plasmid construction
4.1 Vir B10 bait construction
4.2 Vir D4 bait construction
4.3 Expression vector p GBKT7
4.4 Gel extraction of Vir D4 and Vir B10 amplified product
4.5 Ligation of Vir B10 and Vir D4 in p GEM T-easy vector
4.6 Transformation into competent cells
4.7 Transfer to LB-agar plates(Amp+)
4.8 Plasmid extraction
4.9 Digestion reaction
4.10 Terminating digestion reaction
4.11 Ligation with T4 DNA ligase
4.12 Transformation into competent cells
4.13 Transfer to LB-agar plates(Kan+)
4.14 PCR confirmation
4.15 Sequence analysis
4.16 Vir D4-p GBKT7 and Vir B10-p GBKT7 plasmid extraction
5.Auto-activation and toxicity tests of bait plasmids
6.Yeast-two-hybrid screening by mating bait with prey
6.1 Y2H screening by Vir D4
6.2 Y2H screening by Vir B10
7.Isolation of the salivary glands from the ticks
8.Construction of yeast two-hybrid c DNA library of salivary glands
9.Preparation of negative and positive control vectors
10.Selection of the positive prey plasmids
10.1 Positive prey analysis
11.Results
11.1 Bait Construction
11.2 Auto-activation and toxicity test of the Vir B10 bait plasmid
11.3 Auto-activation and toxicity test of the Vir D4 bait plasmid
11.4 Transformation of negative and positive controls
11.5 Cons truction of Y2H cDNA library of D .sil varum salivary gland
11.6 Y2H screening and confirmation of the VirB10 interactions
11.7 Sequencing and analysis of Vir B10 positive prey
11.8 Y2H screening and confirmation of the Vir D4 interactions
11.9 Sequencing and analysis of Vir D4 positive preys
CHAPTER Ⅲ Discussion
CHAPTER Ⅳ Graphical summarization
CHAPTER Ⅴ Conclusion
References
Appendices
Appendices1.1 Buffers,media?s and solutions
Appendix1.1.1:PCR master mix
Appendix1.1.2:1XTEA buffer
Appendix1.1.3:1X agarose gel
Appendix1.1.4:LB liquid medium
Appendix1.1.5:LB-agar solid medium
Appendix1.1.6:100 mg/ml ampicillin
Appendix1.1.7:50 mg/ml kanamycin
Appendix1.1.8:1×PBS buffer composition
Appendix1.1.9:1 M IPTG composition
Appendix1.1.10:20 mg/ml X-Gal composition
Appendix1.1.11:20 mg/ml X- α -Gal composition
Appendix1.1.12:Aureobasidin A stock solution
Appendices1.2 Yeast growth media and supplements
Appendix1.2.1:SDO agar plates
Appendix1.2.2:SDO/X agar plates
Appendix1.2.3:SDO/X/A agar plates
Appendix1.2.4:DDO agar plates
Appendix1.2.5:DDO/X agar plates
Appendix1.2.6:DDO/X/A agar plates
Appendix1.2.7:QDO/X/A agar plates
Appendix1.2.8:Freezing medium
Appendix1.2.9:0.5X YPDA broth
Appendix1.2.10:0.5X YPDA broth
Appendices1.3 Yeast handling and plasmid isolation
Appendix1.3.1:1.1X TE/Li Ac solution
Appendix1.3.2:PEG/Li Ac solution
Appendix1.3.3:Preparation of competent yeast cells
Appendix1.3.4:Yeast plasmid isolation protocol
Appendices1.4 Yeast two-hybrid library and screening
Appendix1.4.1:Construction of normalized Y2H AD library
Appendix1.4.2:Y2H library screening using yeast mating
Appendix1.4.3:Y2H library titration
Appendices1.5 Control plasmid information
Appendix1.5.1:Map of p GBKT7-53 DNA-BD control plasmid
Appendix1.5.2:Map of p GADT7-T AD control plasmid
致謝(Acknowledgements)
作者簡歷(Resume)
本文編號:3662412
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