SNP-based QTL mapping for panicle traits in the japonica sup
發(fā)布時(shí)間:2021-04-18 23:01
Panicle traits directly associated with yield are a target of selection in rice breeding.Although abundant QTL for panicle traits have been identified, there is little information about the genetic basis of panicle traits in japonica super rice(JSR) cultivars. In this study,we identified QTL for panicle traits in three environments using a population of recombinant inbred lines(RILs) derived from the JSR cultivar Liaoxing 1. A total of 197 RILs were genotyped with 285 polymorphic SNP markers. Ph...
【文章來(lái)源】:The Crop Journal. 2020,8(05)SCICSCD
【文章頁(yè)數(shù)】:12 頁(yè)
【文章目錄】:
1. Introduction
2. Materials and methods
2.1. Plant materials
2.2. Experimental design and trait measurement
2.3. Statistical analysis of phenotypic data
2.4. Genotyping
2.5. Linkage mapping and QTL analysis
3. Results
3.1. Phenotypic analysis
3.2. Genetic linkage map
3.3. QTL analysis of panicle traits in individual environments and their BLUP values
3.4. Joint analysis of panicle traits in multiple environments
3.5. Pyramiding effect of QTL on GN
4. Discussion
4.1. Phenotypic variation of panicle traits
4.2. QTL analysis in single and multiple environments
4.3. Novel QTL for panicle traits and their application in rice breeding for high yield potential
5. Conclusions
【參考文獻(xiàn)】:
期刊論文
[1]Ordering of high-density markers by the k-Optimal algorithm for the traveling-salesman problem[J]. Luyan Zhang,Huihui Li,Lei Meng,Jiankang Wang. The Crop Journal. 2020(05)
[2]Genetic mapping of QTL for agronomic traits and grain mineral elements in rice[J]. Gwen Iris Descalsota-Empleo,Amery Amparado,Mary Ann Inabangan-Asilo,Frances Tesoro,James Stangoulis,Russell Reinke,B.P.Mallikarjuna Swamy. The Crop Journal. 2019(04)
[3]QTL mapping and QTL × environment interaction analysis of multi-seed pod in cultivated peanut(Arachis hypogaea L.)[J]. Liang Wang,Xinlei Yang,Shunli Cui,Guojun Mu,Xingming Sun,Lifeng Liu,Zichao Li. The Crop Journal. 2019(02)
[4]Comparative study of estimation methods for genomic breeding values[J]. Chonglong Wang,Qin Zhang,Li Jiang,Rong Qian,Xiangdong Ding,Yaofeng Zhao. Science Bulletin. 2016(05)
[5]QTL IciMapping:Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations[J]. Lei Meng,Huihui Li,Luyan Zhang,Jiankang Wang. The Crop Journal. 2015(03)
[6]利用重組自交系群體檢測(cè)水稻條紋葉枯病抗性基因及QTL分析[J]. 丁秀蘭,江玲,劉世家,王春明,陳亮明,程兆榜,范永堅(jiān),周益軍,萬(wàn)建民. 遺傳學(xué)報(bào). 2004(03)
本文編號(hào):3146325
【文章來(lái)源】:The Crop Journal. 2020,8(05)SCICSCD
【文章頁(yè)數(shù)】:12 頁(yè)
【文章目錄】:
1. Introduction
2. Materials and methods
2.1. Plant materials
2.2. Experimental design and trait measurement
2.3. Statistical analysis of phenotypic data
2.4. Genotyping
2.5. Linkage mapping and QTL analysis
3. Results
3.1. Phenotypic analysis
3.2. Genetic linkage map
3.3. QTL analysis of panicle traits in individual environments and their BLUP values
3.4. Joint analysis of panicle traits in multiple environments
3.5. Pyramiding effect of QTL on GN
4. Discussion
4.1. Phenotypic variation of panicle traits
4.2. QTL analysis in single and multiple environments
4.3. Novel QTL for panicle traits and their application in rice breeding for high yield potential
5. Conclusions
【參考文獻(xiàn)】:
期刊論文
[1]Ordering of high-density markers by the k-Optimal algorithm for the traveling-salesman problem[J]. Luyan Zhang,Huihui Li,Lei Meng,Jiankang Wang. The Crop Journal. 2020(05)
[2]Genetic mapping of QTL for agronomic traits and grain mineral elements in rice[J]. Gwen Iris Descalsota-Empleo,Amery Amparado,Mary Ann Inabangan-Asilo,Frances Tesoro,James Stangoulis,Russell Reinke,B.P.Mallikarjuna Swamy. The Crop Journal. 2019(04)
[3]QTL mapping and QTL × environment interaction analysis of multi-seed pod in cultivated peanut(Arachis hypogaea L.)[J]. Liang Wang,Xinlei Yang,Shunli Cui,Guojun Mu,Xingming Sun,Lifeng Liu,Zichao Li. The Crop Journal. 2019(02)
[4]Comparative study of estimation methods for genomic breeding values[J]. Chonglong Wang,Qin Zhang,Li Jiang,Rong Qian,Xiangdong Ding,Yaofeng Zhao. Science Bulletin. 2016(05)
[5]QTL IciMapping:Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations[J]. Lei Meng,Huihui Li,Luyan Zhang,Jiankang Wang. The Crop Journal. 2015(03)
[6]利用重組自交系群體檢測(cè)水稻條紋葉枯病抗性基因及QTL分析[J]. 丁秀蘭,江玲,劉世家,王春明,陳亮明,程兆榜,范永堅(jiān),周益軍,萬(wàn)建民. 遺傳學(xué)報(bào). 2004(03)
本文編號(hào):3146325
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